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Part I: Single-cell RNA sequencing data analysis using QIAGEN CLC Genomics Workbench

Details

Date:
August 15, 2023
Time:
1:00 pm - 2:30 pm
Website:
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  • Venue

    • Virtual - Americas - EST
    • United States

    August 15, 2023 @ 1:00 pm - 2:30 pm

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    This two-part series will walk you through single-cell RNA sequencing (scRNA-seq) analysis starting with a matrix file or FASTQ files and ending with a deep understanding of key pathways, regulators and cell type signatures within your data.

    This session is for part I of this training. In this session, you'll learn to use QIAGEN CLC Genomics Workbench to perform secondary analysis on your scRNA-seq data. Specifically, you will learn how to:
    • Import your raw FASTQ or processed cell-matrix files
    • Use pre-configured but customizable pipelines/workflows for scRNA-seq data
    • Generate high-resolution visuals and other files from your analysis for publications and biopharmaceutical discoveries. These include:

    o UMAP, t-SNE plots
    o Differential expression table for clusters, cell types, or a combination of both
    o Heat map
    o Dot plots
    o Violin plots

    Part II of this training takes place on Wednesday, Aug. 16. It focuses on interpreting scRNA-seq data using QIAGEN Ingenuity Pathway Analysis (IPA) to understand key pathways, regulators and cell type signatures within your data. Here you can register for Part II: https://qiagen.zoom.us/webinar/register/4716889476421/WN_IA23wGOhQMa_dSc6QJiTkw

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