Per feedback from recent trainings, we are hosting a training focused on biomarkers and drug target investigation through effectively utilizing high quality curated public proteomics expression data. OmicSoft Lands database is a high-quality curated repository which contains gene and protein expression data derived from a variety of sources such as CPTAC, TCGA, HPA, GTEx and more.<\/p>\n

Using OmicSoft Lands APIs, you will learn how to:<\/p>\n

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• Easily locate proteomics samples and projects (studies) of interest (example can we locate proteomics data related to the breast cancer or specific drug treatment?)<\/li>\n
• Check expression of a protein of interest (drug target or biomarkers) across different experimental groups or conditions (diseases, treatments, cell types and more) as well as across samples coming from different collections (example is a protein upregulated in breast cancer samples from TCGA and CPTAC but downregulated in normal samples from TCGA, GTEx and HPA?)<\/li>\n
• Correlate protein levels with RNA-seq expression data for the same samples, and compare differential expression results from proteomic and RNA-seq results<\/li>\n
• Investigate whether there is correlation in expression between two (or a group\/list of proteins) across different experimental groups\/conditions (example do two proteins of interest show correlation in expression in TNBC samples? Is protein and gene expression correlated as well?)<\/li>\n
• Derive a protein signature from conditions of interest (example are a group of protein upregulated in disease condition but downregulated upon drug treatment)<\/li>\n
• Perform Geneset Enrichment for a group of proteins<\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"Per feedback from recent trainings, we are hosting a training focused on biomarkers and drug target investigation through effectively utilizing high quality curated public proteomics expression data. OmicSoft Lands database […]","protected":false},"author":1,"featured_media":159146,"comment_status":"open","ping_status":"open","template":"","meta":{"_acf_changed":false,"ct_builder_shortcodes":"","ct_template_type":"","ct_parent_template":0,"_EventAllDay":false,"_EventTimezone":"UTC-4","_EventStartDate":"2024-08-15 13:00:00","_EventEndDate":"2024-08-15 14:00:00","_EventStartDateUTC":"2024-08-15 16:00:00","_EventEndDateUTC":"2024-08-15 17:00:00","_EventShowMap":false,"_EventShowMapLink":false,"_EventURL":"https:\/\/qiagen.zoom.us\/webinar\/register\/9216600607968\/WN_rylxsfK8SXu8CUdJEVe-hA#\/registration","_EventCost":"","_EventCostDescription":"","_EventCurrencySymbol":"$","_EventCurrencyCode":"USD","_EventCurrencyPosition":"prefix","_EventDateTimeSeparator":"","_EventTimeRangeSeparator":"","_EventOrganizerID":[0],"_EventVenueID":[84389],"_OrganizerEmail":"","_OrganizerPhone":"","_OrganizerWebsite":"","_VenueAddress":"","_VenueCity":"","_VenueCountry":"","_VenueProvince":"","_VenueState":"","_VenueZip":"","_VenuePhone":"","_VenueURL":"","_VenueStateProvince":"","_VenueLat":"","_VenueLng":"","_VenueShowMap":false,"_VenueShowMapLink":false,"_tribe_blocks_recurrence_rules":"","_tribe_blocks_recurrence_description":"","_tribe_blocks_recurrence_exclusions":"","_tribe_events_status":"","_tribe_events_status_reason":"","_tribe_events_is_hybrid":"","_tribe_events_is_virtual":"","_tribe_events_virtual_video_source":"","_tribe_events_virtual_embed_video":"","_tribe_events_virtual_linked_button_text":"","_tribe_events_virtual_linked_button":"","_tribe_events_virtual_show_embed_at":"","_tribe_events_virtual_show_embed_to":[],"_tribe_events_virtual_show_on_event":"","_tribe_events_virtual_show_on_views":"","_tribe_events_virtual_url":"","footnotes":""},"tags":[38,49,105],"tribe_events_cat":[],"class_list":["post-159145","tribe_events","type-tribe_events","status-publish","has-post-thumbnail","hentry","tag-omicsoft","tag-omicsoft-api","tag-omicsoft-lands"],"acf":[],"yoast_head":"\n